Skip to main content

Table 1 Polygenic prediction of Parkinson’s measures in the Tuebingen patient sample

From: Transcriptomic changes in oligodendrocytes and precursor cells associate with clinical outcomes of Parkinson’s disease

  

UPDRS-III

Montreal cognitive assessment

Beck depression inventory-II

N

 

514

450

379

GBA1 model

 GBA1_ODC_DEG

standardized beta

− 0.0297

0.002

− 0.060

 

P value

0.549

0.959

0.299

 GBA1_OPC_DEG

standardized beta

0.003

0.088

0.014

 

P value

0.947

0.055*

0.782

 GBA1_MG_DEG

standardized beta

0.024

0.006

0.025

 

P value

0.622

0.895

0.665

 

Adj. R2

0.037

0.143

0.022

 

Model P value

8.8 × 10–4

4.4 × 10–13

0.044

LRRK2 model

 LRRK2_ODC_DEG

standardized beta

0.038

− 0.074

0.099

 

P value

0.388

0.101

0.054*

 LRRK2_OPC_DEG

standardized beta

0.005

0.025

− 0.152

 

P value

0.892

0.567

0.0002**

 LRRK2_MG_DEG

standardized beta

− 0.027

0.010

− 0.045

 

P value

0.546

0.810

0.373

 

Adj. R2

0.038

0.14

0.049

 

Model P value

7.2 × 10–4

8.1 × 10–13

9.5 × 10–4

  1. The bold P-values are significant values i.e. P-value < 0.1
  2. Linear regression using the sex, age and genetic principal components as control variables
  3. *Denotes significance at P ≤ 0.1
  4. **Denotes significance at P ≤ 0.05
  5. UPDRS Unified Parkinson Disease Rating Scale, ODC Oligodendrocytes, OPC Oligodendrocytes precursor cells, MG Microglia, DEG Differentially expressed genes